The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata
Results
Genome-based classification of micromonosporae with a focus on their biotechnological and ecological potential
Biology of Fungi and Their Bacterial Endosymbionts
Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
Transcriptomics reveal a mechanism of niche defense: two beneficial root endophytes deploy an antimicrobial GH18‐CBM5 chitinase to protect their hosts
Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
Genomic insights into the Acidobacteria reveal strategies for their success in terrestrial environments
Viral elements and their potential influence on microbial processes along the permanently stratified Cariaco Basin redoxcline
MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
Desert truffle genomes reveal their reproductive modes and new insights into plant–fungal interaction and ectendomycorrhizal lifestyle
Discordant population structure among rhizobium divided genomes and their legume hosts
