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Back in the Lab: the 2023 Summer Intern Experience
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Defining a Pan-Genome for Antarctic Archaea
… environments, and researchers are interested in learning how these microbes have learned to adapt from marine to … offers insights into microbial evolution, as well as how Antarctic microbial communities contribute to global … has been enabled through the JGI Community Science Program (CSP) . Cavicchioli and his team compared two strains of …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… to the future of the institution. Their talks shed light on how the JGI was established, all that it has contributed, … his time involved in the project, mostly focused around how to best work together to achieve great success. “For the … encountering JGI users, he was greeted with praise for the how hard staff worked to help users achieve their project …
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Workforce Development & Education Outreach
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… you have to perform, the kind of tasks you’re given and how this is going. Tahirah Williams : I hope to gain … was just really, really exciting for me and learning how to use the capabilities of the supercomputers here to … something that has been really exciting to be able to learn how to do. Ravikiran Madichetty : The best part of interning …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … Lab led to the identification of key microbial culprits in carbon fixation in the dark ocean. Combining single cell … nitrogen loss in these waters. The top image on the left shows how, from a single bacterial cell (seen here in a glass …
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Better Genome Editing for Bioenergy
… before felling their research problem: at a genetic level, how does  Y. lipolytica work? The project was a … CRISPR-Cas9 in order to interrogate each one’s function. However, the team first needed to fix a defect in the … no prior known function. The project’s success demonstrates how to sharpen the CRISPR-Cas9 tool for a non-conventional …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential … U.S. Department of Energy (DOE). By better understanding how poplar responds to its intimate associations with … Innovation (CBI) at Oak Ridge National Laboratory. To see how the fungus affected poplar growth, the team compared …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
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Computationally Classifying Fungal Lifestyles
… researchers developed an algorithm that “taught” a computer how to classify 101 representative genomes of … of  Dothideomycetes could provide more insights into how these fungi have adapted to stress and host specificity, … enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have contributed toward …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on how bacteria function and colonize diverse environments. The … work enabled by the JGI’s Community Science Program (CSP) . The Impact Cyclic di-GMP controls microbial … work was enabled in part by a proposal to the DNA Synthesis CSP call , and the results are described in ACS Chemical …
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Statement on the Use of Genomics Data
… rights under JGI’s policy. In parallel, as of March 2nd, 2021, the JGI temporarily halted all automated submissions … issued a Request for Information (RFI), closing April 21st, 2021, to solicit additional community feedback on proposed … current data policies for gaining a better understanding of how changes may affect data-producing users and other users. …
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