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Metagenome Program
… along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing … of viral, microbial, and microeukaryote genomes and mobile genetic elements, linked to custom interfaces and … We leverage  genome-resolved metagenomics and targeted gene searches to expand representation of uncultivated …
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Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes
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Genome expansion by allopolyploidization in the fungal strain Coniochaeta 2T2.1 and its exceptional lignocellulolytic machinery
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Plasmid Copy Number Engineering Accelerates Fungal Polyketide Discovery upon Unnatural Polyketide Biosynthesis
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A nucleoside signal generated by a fungal endophyte regulates host cell death and promotes root colonization
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Exploring Proteomes of Robust Yarrowia lipolytica Isolates Cultivated in Biomass Hydrolysate Reveals Key Processes Impacting Mixed Sugar Utilization, Lipid Accumulation, and Degradation
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Gene duplication, horizontal gene transfer, and trait trade-offs drive evolution of postfire resource acquisition in pyrophilous fungi
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Cinnamic Acid and Sorbic acid Conversion Are Mediated by the Same Transcriptional Regulator in Aspergillus niger
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Polar Phytoplankton Need Zinc to Cope with the Cold
… peering into the function and activity of phytoplankton genes and looking at how communities of these microalgae … (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this collaboration, in 2017, they published … contains expanded genes for proteins requiring zinc. Co-expression analysis as well as laboratory culture …
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Ancient Algae Reveal Secrets of Plant Evolution
… Research uncovers the genetic foundations that helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  … minimal resources. Enabling the use of non-arable land for biomass production — that can be converted into biofuels and …
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Marine Microbe Contains Multitudes
… to determine the genome structure of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well …
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