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A Plant Root Atlas for Tracking Developmental Trajectories
… nearly 100,000 single root cells and combining the information with previously published datasets. The work was  recently … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Understanding Wildfire Recovery, Starting in Soil
… a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi … a multi-institutional team of researchers collected soil samples from a wildfire that burned at the Colorado-Wyoming … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through … to balance its  Data Release and Utilization Policies with the DOE mandate to provide data access widely to the … NCBI systems. In addition, the JGI issued a Request for Information (RFI), closing April 21st, 2021, to solicit …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, described his student’s … “This exercise helped us in filling or updating geographic information for nearly 1,100 samples,” said Reddy. Kaushal also reviewed and assigned …
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Mapping the Earth’s Hidden Fungal Kingdom
… written in a yet-to-be-deciphered language. Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program and JGI users have … genome representative, while others remain completely unsampled. This creates a bottleneck: Without genetic …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. … in human and other vertebrate genomes. When he joined the JGI, he worked as a project scientist and then as a research … Free-Living Growth and during Nitrogen-Fixing Symbiosis with  Medicago spp. Msystems 7 (1), e01092-21 3. Baumgart et …
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Logos and Templates
… The JGI Style Guide offers tips on JGI logo usage - please follow these guidelines. Logos JGI logo – stacked JGI logo – horizontal JGI logo – indicia …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of … not sequenced by JGI, if PIs are interested are working with us please contact me at [email protected] 5.  Q: If … is based on a model that is not based on a genome model with PhycoCosm, how do we go about getting it in your …
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Annual Meeting 2027
…   Save the Date: March 16–18, 2027 The next JGI Annual Meeting will be held in March 2027 at the Oakland … Stefani Ferreira , JGI Administrative and Logistics Support  …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub … located at Lawrence Berkeley National Laboratory, have collaborated with global researchers on projects related to understanding … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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User Executive Committee Charter
… The JGI User Executive Committee (UEC) represents the JGI user … community and promotes communication and collaboration within the user community. UEC responsibilities include: … meeting such as duration, location, and cost; Communicate with the user community and bring forward user suggestions …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… displacing these important cold-water communities of algae with warm-adapted ones, a trend that threatens to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … expedition to explore, collect and catalog samples, and look for patterns in algal communities, …
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