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Triggering Morel Fruiting
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every … the fruiting-related decomposition mechanisms of morel with multi-omic approaches, our results revealed a striking …
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Finding the Fermenters
… to convert food into energy. However, in environments with little or no oxygen, life had found other ways to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … than 400 cultured rumen prokaryotes from the  Hungate1000 project . They also used the tool to predict possible …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… what makes polar photosynthesizers tick. He’s working with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Program makes genomes and multi-omics data from JGI CSP projects publicly available at the PhycoCosm portal . …
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Busting the Unbreakable Lignin
… anaerobic fungi could be used to effectively modify lignin without oxygen and make use of it, it would change the … the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential …
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Picking Up Threads of Cotton Genomics
… fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green pods in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … for all this new cotton work, and even the original cotton project was to try to bring in molecular methods of breeding …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable research and … lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and the data has been …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California State …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the mechanisms through which sorghum is equipped to deal with adverse environmental conditions, researchers hope to … in Sorghum (EPICON) is a five-year, multi-institution project funded by the DOE Office of Biological and …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution … the primary author on this publication and drove the entire project, Visel explained. She continued working virtually …
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A Plant Root Atlas for Tracking Developmental Trajectories
… 100,000 single root cells and combining the information with previously published datasets. The work was  recently … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Phytozome and will be available for future single-cell projects.” The Berkeley Lab  Biosciences Area has been …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on … Oak Ridge, Tennessee. Recently, Lawrence, in collaboration with researchers from ORNL, Lawrence Berkeley National … . “There was a lot of freedom to explore,” he recalled. His project involved developing an algorithm and although the …
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