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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have … microbes are no exception. Back in 2011, JGI-supported researchers published a paper in the journal Science. It … scientists.”  Using samples of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new genetic mapping strategy … members of a given species. These approaches don’t allow researchers to compare across very distant species that no …
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A Model System for Perennial Grasses
… genomes offer insights to drought tolerance. The Science Researchers have developed a genomic model to study drought … complete genomes from varieties that diverged over a million years ago. The hallii variety thrives in desert … and floods. The U.S. Department of Energy (DOE) supports research programs for developing methods for converting …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus sequences.  … that came with crayons in various shades of white. To researchers searching for sequences of RNA viruses in large … online September 28, 2022, in Cell , a team led by researchers at Tel Aviv University in Israel, the National …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted the metabolomic analysis … to academic, government agency, non-profit, and industry researchers worldwide.  Q:  To what extent is natural soil a … in South Africa, How can this team be of help to us in research design and execution? A:  Human health is outside …
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A Complex Confection Decoded: Sugarcane Reference Genome
… major crop without a reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, … consortium. With the genetic code of sugarcane, researchers were able to map the location of genes that …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have … human chromosomes: Lawrence Berkeley National Laboratory researchers were studying Chromosome 5, which contains about … and diabetes mellitus. Los Alamos National Lab researchers investigated Chromosome 16, which contains about …
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Tanja Woyke Elected to American Academy of Microbiology
… Congratulations to the JGI’s Tanja Woyke , who has been … was among the Lab’s 2015 Women @ the Lab honorees. Woyke’s research focuses on developing and harnessing single-cell … Woyke, two JGI users were also elected to the AAM: fungal researcher Jason Stajich of the University of California, …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. … complex and difficult to sequence and understand. A team of researchers led by Algal Genomics Program lead Igor … Lab), have unveiled PhycoCosm in the Nucleic Acids Research journal. The genome portal reinforces the JGI’s new …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with … of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets … with tracings of stable, heavy isotopes, SIP allows researchers to go beyond understanding which microbes are …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold much of … to energy, are made up heavily of sphagnum mosses.  New research identifies sex chromosomes in the plant and … growth rates, decomposition, and carbon sequestration. Researchers wanted to better understand how sphagnum adapts …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have … of biofuels. Since 2010, the JGI has partnered with researchers around the world to map out genomes of rumen … Science Program proposal that started six years earlier, researchers put together what they called the Hungate1000, a …
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