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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. Most of those … send their samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum walks through …
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JGIota: Looking Back at Sequencing for Soybeans
… able to look into soybean’s strengths – along with a fungus that threatens this important crop. Hear more about that work from researchers Gary Stacey (University of …
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Cultivating Symbiotic Antarctic Microbes
… ecological consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental … researchers have been able to gain further insights about how microbes have adapted to thrive in polar … dhesion and  r estriction  e ndonuclease domains—of up to 8,500 amino acids in length. These were actively synthesized …
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Extracting the Secrets of Secondary Metabolites
… combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those … and other industries — yet there’s still so much about them we don’t know.  Unlocking the power of secondary … User Facility, is supported under contract DE-AC02- 05CH11231. …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… enzyme family evolved across 90 species. “One unique thing about this work was our focus on all the kingdoms, including animals, plants, bacteria, … enzymes across 90 species. They queried the genomes of 15 species from each of six kingdoms: eubacteria, archaea, …
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Decoding Yellowstone’s Microbial Mats
… adopted new technologies, and made a few discoveries about the microbial mat denizens.  …
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JGI & KBase at PAG XXVII
DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. Stop by and chat with representatives from KBase and the JGI about collaborative science opportunities. Learn how to … with the JGI Community Science Program, and how you can use the KBase system to accelerate your plant genomics …
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THE Bioenergy Tree
The US Department of Energy’s favorite tree is poplar. They’re … who have uncovered remarkable genetic secrets that bring us closer to making poplar an economical and sustainable source of energy and materials. …
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Adopt-A-Genome
… (JGI) and Matt Escobar (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California State Fresno) and two …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting … Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS proposals have helped advance her research. Learn more  here about the “Facilities Integrating Collaborations for User …
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JGI announces final round of 2022 Functional Genomics awardees
… functional genomics research from potential users who need help translating genomic information into … the next deadline is July 31. You can learn more about our Community Science Program here .  …
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The Busy World of Deep Sea Eruptions
Emily St. John, Gilberto Flores, and Peter Girguis about sampling these communities, and understanding how …
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