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Three Join the JGI User Executive Committee
The JGI User Executive Committee (UEC) recently welcomed three new … Society of America and is also a National Microbiome Data Collaborative (NMDC) Champion. As an early career … JGI offers, as well as proposal review procedures and the organization of the JGI Annual Genomics of Energy & …
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Dan Rokhsar
… of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. Rokhsar joined the … and evolutionary biology. Dr. Rokhsar’s research is focused on understanding the origin, evolution, and diversity … developmental biology. In addition to this evolutionary focus, his work on plant genomics is targeted towards the …
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Scaling High‐Resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States
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The Power of One, Amplified
… single cell genomics complements metagenomics studies. The Science Researchers demonstrated the value of conducting … genomics can add significant value to the other commonly used culture-independent sequencing approaches including … of microbial genomes directly from environmental sequence data, by piecing each genome together from large mixtures of …
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JGI@25
… our collaborations and capabilities to enable great science that will help solve energy and environmental … Building was painted by Berkeley-based artist Nigel Sussman and dedicated at our 2022 Annual Meeting.  … Notable …
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A Collaboration to Improve Plant Genome Annotations Across Species
… specific conditions – in over a dozen plants. To learn more about the project, HudsonAlpha’s Research Communication … It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint Genome Institute (JGI)*, … to link experimental evidence across species. Centralized databases with large-scale transcriptome projects such as …
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Scaling Up Existing Skill Sets
… experience working intermediately between academia and industry, which is something I didn’t even know existed before. … my Ph.D. What is/has been one of your favorite things about your JGI internship?  Doing the JGI internship has … from private industry. I really liked the fairly flat organizational structure, and found everyone to be welcoming …
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How Maize Makes An Antibiotic Cocktail
… a family of compounds that protects it against infections — using surprisingly few enzymes. The Science Maize ( Zea mays ) produces a plethora of … the ability make zealexins, and harnessed gene expression data from these lines to identify genes associated with …
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DOE JGI Interns Share Their Summer Experiences
Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time … part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, among the interns were two … groups, respectively. Each of the interns spoke briefly about their time at the JGI at …
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Evolution of a Fungal Gene Expression Regulator
… date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can … the genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may … Resource Center (GACRC) and Georgia Genomics and Bioinformatics Core (GGBC) at the University of Georgia …
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The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown‐rot mechanism involving Fenton chemistry
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Thermus sediminis sp. nov., a thiosulfate-oxidizing and arsenate-reducing organism isolated from Little Hot Creek in the Long Valley Caldera, California
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