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Abiotic selection of microbial genome size in the global ocean
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Protocol for single-cell isolation and genome amplification of environmental microbial eukaryotes for genomic analysis
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Extracting the Secrets of Secondary Metabolites
CRAGE-CRISPR combo helps further demystify biosynthetic gene … Recombinase-Assisted Genome Engineering) is a technique researchers can use to integrate large genetic … luminescens and its secondary metabolites work could yield new tools for pest control. Secondary metabolites are highly …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of large and … viruses (NCLDV) supergroup. The expansion of the diversity for large and giant viruses offered the researchers insights … environmental conditions. Function prediction on the 2,000 new giant virus genomes led the team to uncover a prevalence …
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New Microviridae isolated from Sulfitobacter reveals two cosmopolitan subfamilies of single-stranded DNA phages infecting marine and terrestrial Alphaproteobacteria
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Calculating the Costs of Multiple Switchgrass Gene Copies
Scientists have discovered that the candidate bioenergy feedstock … of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … production. Building on the framework provided by our new switchgrass manuscript , we plan to use existing data as …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where … for JGI users.  Using cutting-edge mass spectrometry-based techniques, the platform delivers rich metabolite profiles … her team work with other JGI scientists in development of new, advanced mass spectrometry research products such as …
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Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day … relevant to living on a changing planet. Transcript for Audio   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days occur in April: …
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Large-scale contamination of microbial isolate genomes by Illumina PhiX control
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The integrated microbial genomes system: an expanding comparative analysis resource
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