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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse … gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are … the University of Konstanz and the University of Vienna  reported recovering draft metagenome-assembled genomes for …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Zhong Wang
Research in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up … of genome and computational technologies, in the coming years the Wang group will continue its effort to explore new …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a … practice ideas presented in a  Trends in Biotechnology  review piece by Yoshikuni and JGI colleagues Jing Ke and …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at … Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, developed a method to correctly … (eight copies of each chromosome). All of these genomes are available on the JGI plant portal  Phytozome . “The broad …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … Lab), has looked for DGRs in a broad range of publicly available datasets. They’ve discovered that DGRs are not …
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Help from Citrus’ Bitter, Hardier Cousin
… to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … JGI’s Daniel Rokhsar, published over the last half-dozen years, on the ancestral origins of  Citrus sinensis , the …
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MycoCosm portal: gearing up for 1000 fungal genomes
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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program within the DOE Office of Science. …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on … … The Deputy of Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data … technologies and providing a vision for future technical JGI directions for DOE User science. … Complete Publications …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on … his PhD dissertation defense presentations and beyond. In 2018, a friend of his wife’s passed along an open postdoc … your point across as quickly as possible,” he said. After years of practice presenting his science and learning what …
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