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Using BLAST to Teach “E-value-tionary” Concepts
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A Guide to Gene‐Centric Analysis Using TreeSAPP
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JGI Welcomes New UEC Members
The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and … and career stages. The election period concluded on October 21. The results are in and JGI extends a warm welcome to the …
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A One-Stop Shop for Analyzing Algal Genomes
… genomic data on algae into one place, PhycoCosm allows users to easily compile data that answers what genes are … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Office of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. S.C., B.K., and I.V.G. were supported in part …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … completing the human genome, the JGI became a national user facility. The staff and resources shifted to offering …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Laboratory, built off past … Office of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. … SMC is the most comprehensive BGC database …
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Pinning Down a Piece of Photosynthesis
… an array of experiments at universities and national user facilities, researchers found that this protein detects … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and longtime JGI collaborator Sabeeha Merchant’s group. In 2011, they inventoried a swath of blueprints to find parts …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that …
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Annotation of metagenome short reads using proxygenes
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Transcriptional control of Clostridium autoethanogenum using CRISPRi
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting … “While I never said this out loud,” Drell said, speaking to users and staff at the JGI’s 2022 User Meeting, "I think I had the easiest job in the office.” …
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Neha Varghese
… interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced …
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