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Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
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Beyond linear sequence comparisons: the use of genome-level characters for phylogenetic reconstruction
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Generation of Long Insert Pairs Using a Cre-LoxP Inverse PCR Approach
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JGI on the 2021 Highly Cited Researchers List
… associate climate adaptations with switchgrass biology. The information could be useful toward the DOE’s interest in … JGI staff who mentored students this past year, through programs including the JGI-UC Merced Genomics Internship Program and the DOE Office of Science Graduate Student …
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Gotta Catch 'Em Gall
… ways to engineer plants. So they’ve looked into wasps that program oak trees to raise their young in structures called … unfolded, and how they worked with the JGI's metabolomics program to find out more about these weird little pods. …
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Game On: High School Students Drive Everglades Metagenomics Study
… email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took special interest in it because she … many statistical tests for raw data and how to use some bioinformatics tools for analysis to help them focus on what to …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus and … DOE Office of Science as part of the Early Career Research Program (ECRP). His project, “Characterizing Virus-Driven …
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SPRUCE-ing Up Science
… the DOE Joint Genome Institute (JGI)-UC Merced internship program, Lawrence is now a postdoctoral researcher at the … despite global warming.  At ORNL, Lawrence brings a bioinformatics expertise, a combination of biology and computer … to develop a tool that leveraged machine learning to help users determine which computer program would best serve …
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JGI-UC Merced Interns Share Their 2021 Experiences
… for their PhD research. And for the first time in this program’s history, two interns returned to re-engage with … on their research project! The JGI-UC Merced internship program was founded in 2014 with the goal of inspiring …
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FinisherSC: a repeat-aware tool for upgrading de novo assembly using long reads
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Integration of phenotypic metadata and protein similarity in Archaea using a spectral bipartitioning approach
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Obtaining genomes from uncultivated environmental microorganisms using FACS–based single-cell genomics
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