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Frederik Schulz
… biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded project, Dr. Schulz established a … University of Vienna (Austria) PhD Microbial Ecology and Bioinformatics, University of Vienna (Austria) …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… computing infrastructure and analysis. This way, JGI users — both primary, data-generating users, as well as … access to high-quality, assembled datasets from all of this information. The JGI aims to create pipelines, tools and … from this sample set through the Community Science Program, it was the largest project the JGI had ever put …
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Boosting Small Molecule Production in Super “Soup”
… through the Emerging Technologies Opportunity Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after … Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the … JGI Director Eddy Rubin. “QSB faculty are active DOE JGI Community Science Program collaborators, and UC Merced has …
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Picking Up Threads of Cotton Genomics
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … include Jane Grimwood and Jeremy Schmutz of JGI’s  Plant Program , both faculty investigators at the HudsonAlpha … analysis on JGI’s plant data portal  Phytozome , which is a community repository and resource for plant genomes. They …
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Promoting the Power of Viral Metagenomics
… published in the journal  Annual Review of Biomedical Data Science . The following guest piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since early 2020, people all … data it is possible to answer a wide variety of important questions such as which organisms the viruses may be …
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Alabama A&M Interns Access An Abundance of Knowledge
… Institute and Alabama A&M University piloted an internship program to bring students to the JGI for research training … A&M University this fall for my master’s in plant soil science and my career focus is plant breeding. Ti’Yanna … Ti’Yanna Watson: The best part about interning here is the community aspect. Everyone here has also been so very nice …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… made possible by CRISPR-Cas9; the Weizmann Institute of Science’s Assaf Vardi, who delved into algae blooms and the … and barley. During her keynote speech to JGI staff and users at our 2022 Annual Meeting, Wessler discussed the … is impacted by TE activity. Her lab has leveraged bioinformatics in computational analysis to identify and …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… sectors and it is still seen today as a massive feat in science and collaboration. In closing his presentation, … to the JGI’s forging new collaborations with the FICUS program, through which researchers can access multiple DOE … “While I never said this out loud,” Drell said, speaking to users and staff at the JGI’s 2022 User Meeting, "I think I …
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Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… from UDE familiarized themselves with the research programs and user facilities at Berkeley Lab. Commenting on the visit, … single cell and systems biology, omics, and big data science, machine learning for experimental science, energy … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Microbiomes (IMG/M) platform — has been developed to help inform scientists and researchers more about the patterns … Office of Science’s Biological and Environmental Research program because it also allows scientists to understand the … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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