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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … The planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers … organisms to respond to environmental stresses or mediate interactions with each other (sometimes antagonistic ones, …
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Genome Insider
… — JGI Users — and dives into their work on all kinds of organisms, from plants and fungi to microbes and viruses. Listen in to explore the data that illuminates …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … a wide range of ecosystems ranging from wetlands to tree islands to cattails. In 2018, the US Department of Energy … Everglades in Palm Beach County, and particularly about the microbes that play roles in the methane cycle. Their data …
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Mining Metagenomes for Cas Proteins
… Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … to be unearthed in sequencing and analyzing uncultivated microbes. Summary The CRISPR-Cas system is an immune … elements by incorporating short sequences from infecting viruses and phages. In the event of a new infection, the …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … small fraction of Earth’s microbial diversity. Because most microbes cannot be cultivated under laboratory conditions, … .) Nayfach also worked with another team on predicting host-virus connections between all viruses in  IMG/VR (Virus) and …
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Matthew Kellom
… Matt is broadly interested in the interactions between microbial life and environment, and … places that are considered to be inhospitable to humans are of particular interest. Matt also supports various CSP and …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired … internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… As warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … such as tourism and recreation, on which coastal and island nations, like the UK, depend, said Mock. “I think …
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission … engineering tools for non-model organisms, modulating microbe-microbe and plant-microbe interactions in various environments to improve crop yield, … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how … dominated Copper River Delta. They’re looking at how the microbes in these high latitude wetlands, such as the Copper …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this … observations regarding the contributions of algae and viruses to the ecosystem were noted, but require further …
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