Search

… it, viruses are most likely in your system and in your data, and they’re probably influencing the microbes there,” … In 2016, Nikos Kyrpides at the JGI led a team that combed datasets from around the world, finding over 125,000 partial … its existing Integrated Microbial Genomes & Microbiomes database to include a dedicated section for viruses, so …

… metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State …

Czech Academy of Sciences first needed to build a detailed database on the denizens in the soil. While large protein databases, like UniProt, exist, are not specific enough for … from their soil samples. This gene expression dataset was particularly important for characterizing fungal …

… a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge … — Summit and Frontier — that process terabytes of data with MetaHipMer2. And the National Energy Research …

Lab (short talk): “How do we make interdisciplinary sample data more FAIR?” December 16 7:55am, Convention Center Rm … “EMSL’s 1000 Soils Project: core collection strategy and data types available” December 17  6:40am Convention Center … Weisenhorn, KBase at Argonne (lightning talk): “Applying Data Standards and Reproducible Workflows To Advance Earth …

Communications , two research teams joined forces and data sets to describe bacterial genomes for related … Carnevali and Schulz sharing co-first authorship. Their data suggests that the shared common ancestor of all five …

… more researchers. Ultimately, the goal is to generate SIP data that can be useful to multiple teams and analyses. This …

… by the JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and …

… and that’s going really well. And having the sequence data available for us to enable that research will have a … on Phytozome … 3 P. pachyrhizi genomes on MycoCosm … Plant Datasets … Fungal Datasets …

… find genetic regions of interest.” The combination of field data and genetic information has allowed the research team … cutting-edge genomics and genetic analysis with large scale data collection,” he added. Jeremy Schmutz , head of the  … is direct evidence of climatic adaptation. The team’s database of genes that underlie adaptation to climate …

… quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year history. In … include JGI’s emerging leadership role in a Microbiome Data Science effort (pages 37-39) and the launching of a …