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… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research … Microbiology Resource Announcements … Education … Selected Publications … Awards and Honors …

Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … that reveals in situ functional activities of specific microbial groups within complex communities.  The Microscale … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …

Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical labelling …

… underwater volcanoes and hydrothermal vents — where lively microbial communities thrive, and even support entire ecosystems. Hear … St. John, Gilberto Flores, and Peter Girguis about sampling these communities, and understanding how they’ve adapted …

… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … a computer could use to conduct a similar type of search in microbial and metagenomic databases. In this case, the … “We can now start inquiring into their impact on microbial communities in the environment and also those associated …

Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be … (KBase) . Metagenomics is the study of the microbial communities in the environmental samples without needing to …

To expand access to integrated data, improve tools and infrastructure as well as … cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … to facilitate these efforts. Particular areas of emphasis will be the development of tools and …

Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 … was recognized for “advances in sequence-based studies of microbial assemblies, revealing the roles of microbial communities in carbon cycling, in interactions with plants, …

A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …

… joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …