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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … genome is cited in roughly 10% of all since-released publications on green algae. “The Chlamy genome launched …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … for multiple applications.       Despite advances in sequencing technologies and computational methods in the … have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base … themselves can also be modified. The best-known example of a modified DNA base is a methylation of the base cytosine …
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Len Pennacchio
Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … technical JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast … how variation in regulatory sequences influences human disease/biology. Assessing and exploiting next generation …
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Hypoxic survival requires a 2-on-2 hemoglobin in a process involving nitric oxide
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … which metabolites. … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting … really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the JGI synthesis …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change impact on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave event in the ocean known as “The …
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … and reconcile the findings, coming up with a single, non-redundant dataset,” said Koonin. “Hopefully, relatively …
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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters …
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