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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang … the goal is to create an entirely human-generated yeast genome. …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director … human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued … and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … “Once you have a landing pad in a strain, you can deliver multiple types of payloads, such as individual genes, whole pathways, genome-editing tools, and reporters.” …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives … Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research … Tanja Woyke is the Microbial Science Program Head as well as …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists … MW, Pontius, W, and Emonet, T. Stochastic coordination of multiple actuators reduces latency and improves chemotactic …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what … freely available online ). It combines and evaluates multiple predictions to reliably match viruses with their … led by scientists at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …
Learn more
Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on … designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… Innovative technology from this biomanufacturing collaboration is … of Energy national user facilities – the DOE Joint Genome Institute and the Molecular Foundry – both located at … The Impact Biomaterials are materials produced by living organisms. The collaboration between the JGI and the Foundry …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month … services,” Fulton said. These emissions come from the whole lifecycle of materials used — from their creation to … a 3-foot long, spiny cactus into its new home at the lab, without any finger pricks. “It’s very funny because you use …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and … researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly … . The comparative framework provided by these high quality reference genome sequences could help researchers better …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs … growth, the team compared poplar cuttings grown with and without an inoculation of the  M. elongata strain PM193 … partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the … in situ gene expression analysis in multicellular organisms. During his postdoctoral training at Lawrence … Axel Visel is the JGI's Deputy for Science Programs. Click …
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