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… A workflow for capturing the genetic make-up of specific uncultivated microbes … of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … within their environments. Summary The traditional shotgun metagenomics approach to learning more about environmental …

… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and communication. Studying … algae and plants. These compounds are key to organisms' interactions with their environments and with each other, …

… to Tanja Woyke, who has been awarded the van Niel International Prize for Studies in Bacterial Systematics for the triennium 2017-2020! … techniques including single-cell genomics and metagenomics. They cited her “landmark” 2013 Nature paper , …

… Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … and analysis of their data at the time. Following the publication of their paper in 2011, Dr. Sekimoto from …

… a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among … the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then allowed the team to ask, for …

… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, … This work was conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …

… Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and there’s more to come in 2020. Researchers at the U.S. Department of Energy (DOE) … “Given the great expertise in microbial genomics and metagenomics of the microbiology-focused groups at the Joint …

… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team … Neurospora crassa, and to identify and decide on the order in which this fungus breaks down plant cell wall materials … We acknowledge the use of deletion strains generated by Grant P01 GM-068087 “Functional Analysis of …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in several Lab …