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Natural Prodcast Episode 19: Bill Fenical
… of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … and we talk about an ongoing project I’ve been working with him on as an exploration into the secondary metabolism … territory for us, and I’m grateful to be working with him, and so happy we got the chance to record this …
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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages … increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By …
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Co‑cultivation of the anaerobic fungus Caecomyces churrovis with Methanobacterium bryantii enhances transcription of carbohydrate binding modules, dockerins, and pyruvate formate lyases on specific substrates
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Ancient Algae Reveal Secrets of Plant Evolution
… land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  … resilient crop varieties able to grow in marginal lands and with minimal resources. Enabling the use of non-arable land … plant resilience and productivity. The algal genomes sequences are available on the JGI’s  PhycoCosm portal. … …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes … The Impact Despite great strides in generating genome sequences for members of the microbial world through bulk … would allow researchers to focus on specific microbes within metagenome samples and associate their sequences with …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, more and more virus sequences are being recovered and identified from … to recover the genomes of these viruses and associate them with their microbial hosts. However, assembling viral …
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Biotech Partners Summer Intern Co-Authors NAR Paper
Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this summer … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have … to energy independence in the U.S. Not only does it pair with maize, the dominant source of bioethanol, in crop … doesn’t yield enough gallons of fuel per acre to compete with gasoline. Yet.  In 2010, soybean became the first …
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Functional characteristics of an endophyte community colonizing rice roots as revealed by metagenomic analysis.
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End-to-end automated microfluidic platform for synthetic biology: from design to functional analysis
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Integrative genomic mining for enzyme function to enable engineering of a non-natural biosynthetic pathway
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