Results

Ecological Dichotomies Arise in Microbial Communities Due to Mixing of Deep Hydrothermal Waters and Atmospheric Gas in a Circumneutral Hot Spring
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Integration of Metagenomic and Stable Carbon Isotope Evidence Reveals the Extent and Mechanisms of Carbon Dioxide Fixation in High-Temperature Microbial Communities
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Viral community analysis in a marine oxygen minimum zone indicates increased potential for viral manipulation of microbial physiological state
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Microbial communities associated with sympagic and planktonic habitats during a polar vortex influencing the North American Great Lakes Basin
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first … that reveals in situ functional activities of specific microbial groups within complex communities.  The Microscale … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in Biology, Boston University ( magna cum …
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SIPs with Standards
… Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which microbes are … SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to …
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Community standards and future opportunities for synthetic communities in plant–microbiota research
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Simon Roux
… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational … knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research …
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Webinar: MycoCosm Tutorial
… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … and the microbial world but we also annotated several Phytophthora genomes; this depends on the scientific … While are still working on finalizing the tree and related publication the tree is still in development and not …
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements … Park of British Columbia, BC Parks). In these springs, temperatures can reach as high as 80°C (~190°F), yet … the genomic analyses to compare the resulting datasets, emphasizing the utility of single cell sequencing to assess …
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