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Draft Genome Assemblies of Ionic Liquid-Resistant Yarrowia lipolytica PO1f and Its Superior Evolved Strain, YlCW001
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High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the … assembly of two Corymbia citriodora subspecies variegata genomes allowed researchers to study the conservation and … list of putative genes from C. citriodora to known TPS gene sequences from Eucalyptus species and other plants. The …
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High-quality draft genome sequence of Flavobacterium suncheonense GH29-5T (DSM 17707T) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5T
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Draft genome sequences of Arthrobacter sp. AZCC_0090 and Mycobacterium sp. AZCC_0083 isolated from oligotrophic subsurface forest soil in the Santa Catalina mountains of Southern Arizona
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Transcriptomic Data Sets for Zymomonas mobilis 2032 during Fermentation of Ammonia Fiber Expansion (AFEX)-Pretreated Corn Stover and Switchgrass Hydrolysates
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … , the scientists thus set out to identify which sgRNA sequences were reliable. In an elegant, quantitative screen, …
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Doubling Down on Known Protein Families
… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the process hinges on referencing to existing genome sequences.  Some of these proteins are what the scientists …
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Taking Stock of the Known and Unknown Microbial Space
… in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research … a census of publicly available bacterial and archaeal sequences. Kyrpides heads the JGI’s Microbiome Data Science … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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High-Quality Draft Genomes from Thermus caliditerrae YIM 77777 and T. tengchongensis YIM 77401, Isolates from Tengchong, China
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Draft Metagenomes of Endolithic Cyanobacteria and Cohabitants from Hyper-Arid Deserts
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, … viruses — to support scientists around the world. Most of those researchers send their samples in from afar, … with names — but not doors — and robots handle a bunch of benchwork. …
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