Results

Comparative genomics of the genus Desulfitobacterium
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Microbial Community Field Surveys Reveal Abundant Pseudomonas Population in Sorghum Rhizosphere Composed of Many Closely Related Phylotypes
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Ecological Dichotomies Arise in Microbial Communities Due to Mixing of Deep Hydrothermal Waters and Atmospheric Gas in a Circumneutral Hot Spring
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Viral community analysis in a marine oxygen minimum zone indicates increased potential for viral manipulation of microbial physiological state
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Microbial communities associated with sympagic and planktonic habitats during a polar vortex influencing the North American Great Lakes Basin
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Dan Rokhsar
… directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team … genome analysis, sequence-based genetic methods, and comparative developmental biology. In addition to this …
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Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software
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SIPs with Standards
… Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which microbes are … SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across … University campuses for biotechnology education as part of a course-based undergraduate resource experience. Hear …
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Community standards and future opportunities for synthetic communities in plant–microbiota research
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Webinar: PhycoCosm Tutorial
… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  … We also have some reference plant genomes to help with comparative studies of algae and we have various protists …
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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