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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. The Science … characteristics. When they tested the screen method on a microbial community from geothermal hot springs, they … those that are in low abundances—and their functional roles in their community. This study shows how the …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint … of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … Implementation of the Index of Cell Identity as an R package … Selected Publications …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have … essential to their economies. It also plays an important role in soil health through nitrogen-fixation and holds clues for maximizing soybean, the common …
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Metatranscriptomic reconstruction reveals RNA viruses with the potential to shape carbon cycling in soil
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Adapted laboratory evolution of Thermotoga sp. strain RQ7 under carbon starvation
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A hemoprotein with a zinc-mirror heme site ties heme availability to carbon metabolism in cyanobacteria
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Leptothrix ochracea genomes reveal potential for mixotrophic growth on Fe(II) and organic carbon
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Metagenomic stable isotope probing reveals bacteriophage participation in soil carbon cycling
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Genomic Characterization of Candidate Division LCP-89 Reveals an Atypical Cell Wall Structure, Microcompartment Production, and Dual Respiratory and Fermentative Capacities.
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… Register here Book your stay at the conference venue This inaugural event will bring together researchers across major ecosystems and disciplines who are developing and applying laboratory ecosystems …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal … three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or hydrogenotrophic (most common); … recent studies now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant … Tringe , JGI’s User Programs deputy and head of the Microbial Systems group through the  DOE Office of Science … program . Her research project, “Microbial Community Structure and Methane Production in California’s Canal …
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