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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that … in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … and even animal and human (for the first time) gut and taxonomically classified into 27 distinct clades (17 of them …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. The …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research … of Phage Impact on Microbial Root … Cross Species Comparison of Plant Single-cell Transcriptomes of Rice and …
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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UC Merced Interns Reflect on Their JGI Summer Projects
Over the course of eight weeks this past summer, 10 students from UC … language processing techniques to categorize genetic information. Learn more about their work here in a series of …
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it to the correct sequence to snip — but not all guides are effective. …
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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against infections — using … revealed that just a handful of enzymes are needed to transform zealexins and related precursors into a bonanza of …
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought … The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
Gardeners and farmers around the country recognize that crop varieties grow best in certain … crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities … for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among … perspectives on what the next five years of innovation could look like. In one article, Micro-Scale Applications … sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was …
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