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JGI@25: Roots of a Mutualist Relationship
… challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published in the journal … more multidisciplinary teams. The work also paved the way for a longstanding collaboration between researchers at the … (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, …
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A Natural Mechanism Can Turbocharge Viral Evolution
… dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” morphology, this means using … ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … only for viruses and other microbes , but for scientists. One emerging industry application of DGRs is to use them to …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the … Genomes Project, which aims to provide a reference genome for each of the fungal families. Researchers had access to …
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Genomic adaptations of the green alga Dunaliella salina to life under high salinity
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 … well as project data entered by external users. The Impact One of the significant challenges in maximizing genomic data …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA … of the 100-page document with over 200 actionable milestones. JGI Director Nigel Mouncey credits JGI Science Program …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Australia but is increasingly farmed in other countries for essential oil production. The recent assembly of two Corymbia citriodora subspecies variegata genomes allowed researchers to study the conservation and … in clusters or duplicate arrays, these genes are prone to rapid genetic expansion which partially explains the …
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Detection of S83V GyrA mutation in quinolone-resistant Shewanella algae using comparative genomics
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Insights into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta)
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Scaffolded and annotated nuclear and organelle genomes of the North American brown alga Saccharina latissima
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Genome sequences of four novel Endozoicomonas strains associated with a tropical octocoral in a long-term aquarium facility.
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an Assistant … developed a method to correctly identify polyploid subgenomes without needing to know the genomes of their … with: Until they came up with this new method, Session mentioned that the analysis for determining the evolutionary …
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