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… diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same place they often source their nutrients — the shii tree, a Japanese relative … atmospheric carbon dioxide.  Summary Researchers sequenced 11 samples from Asia–Australasia and 13 samples from the …

… climate change impact on marine microbial communities. The Science A team of researchers tracked the impact of a … as hurricanes and droughts. Another one began in late 2013, when a large patch of warm ocean water about a third the … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with JGI … genomics, and to help foster a diverse future workforce in science. Since the program’s inception, more than 30 …

Marianne is an affiliate researcher who uses metagenomics to study giant viruses in cold marine …

… led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the … is triggered when nutrients are acquired from an external source.  The work is part of the JGI’s 1000 Fungal Genomes … by the black morel, as well as the gene-expression programs encoding the biochemical processes unveiled by …

Bob uses single-cell genomics and metagenomics to explore how microbes influence people and …

Annotated GenBank File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an open source desktop application written by M. Wayne Davis or … options include SnapGene . … How To Use ApE To save your ApE file as a Genbank file, simply go to File -> Save As …

… to improve the JGI’s capabilities in the areas of metagenomics, single-particle genomics, and metabolic …

… can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by … cultivar R570 has been generated and  reported in the journal  Nature . The work led by researchers at Australia’s … partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of sugarcane …