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Calculating the Costs of Multiple Switchgrass Gene Copies
… (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … evolutionary consequences. A previous study conducted by our research team surveying the genomic and phenotypic … across the species. These are primarily tetraploids (4X or four copies of the genome) and octoploids (8X or eight copies …
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A Step Toward Controlling Soybean Rust
… reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program … Institute for Agricultural Research (INRA)  proposed sequencing a reference genome for  P. pachyrhizi to develop … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Open Frameworks Training the Next Generation of Scientists
… provides training and scientific contributions—including sequencing services and analysis—to participants. Over the … The Impact For decades, the Department of Energy (DOE) has invested in training the next generation workforce … to connect educators and empower them to utilize program resources. MICROnet is  built around a community of instructors …
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Webinar: SIP technologies at EMSL and JGI
… go from start to finish, i.e., QC to separation to library sequencing and assembly. Like others, our turnaround time has been impacted by the pandemic. 3. Q: What instrument / method does the JGI use to pre-screen DNA for enrichment? A:  The … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Complete genome sequence of Ferroglobus placidus AEDII12DO
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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs
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How Filamentous Fungi Sense Food
… importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are … worked with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to …
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Green Algae Reveal One mRNA Encodes Many Proteins
… zofingiensis . “I was scrutinizing the genes of one of our species of algae and kept seeing what looked like … National Laboratory, the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Lab …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… food webs in cold, but fecund polar waters. “A lot of our food comes from the North Atlantic, North Pacific and … led by UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … expressing, the team sequenced their RNA transcripts. All sequencing was done through the JGI Community Science …
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Viruses Reprogram Cells into Different Virocells
… In  their study , which appeared in  The ISME Journal , they focused on how virus-infected microbes are … science initiative between the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … in one proposed research project. For this project, RNA sequencing was done by the JGI, and proteomics and …
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Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium
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Nick Everson
… JGI Operations which include the Safety, Finance, Human Resources, Facilities, IT, Shipping and Receiving, Lab … after serving as the Chief Operating Officer of the DOE Joint Bioenergy Institute and the Operations Deputy for … space and facilities, finance and procurement, human resources, safety, and administrative activities. The Deputy of …
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