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2022 Progress Report
Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National … IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Genome Sequences of Industrially Relevant Saccharomyces cerevisiae Strain M3707, Isolated from a Sample of Distillers Yeast and Four Haploid Derivatives
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds … genes from all possible candidate ancestors are available. Our method clearly identifies the four subgenomes based on non-genic sequences.”  In his words, …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… staff, Mouncey explained: “One of the hallmarks of JGI is our diverse workforce and our diverse collaborators around the world. That said, we … noted that “each year, they bring an invaluable benefit to our group’s research program.” Jess Jarett, a postdoctoral …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
Cone Pool in Mono County, California, scientists have used sequencing methods for the first time to comprehensively … interactions. This work,  recently published in  The ISME Journal , by contrast, relied on methods that eschew … postdoctoral researcher at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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The Case for Conservation
The genome assemblies highlight the multiple advances in sequencing technologies applied to the effort. The Impact … comprise a full third of each moss genome, and are almost four times the size of the next largest chromosome. As the … working with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Fishing for Novel Cellulose Degraders
… led by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … pools, followed by whole genome amplification and shotgun sequencing. The team first tested the approach on bacterial … enzyme activity assay. The work was  reported in  The ISME Journal . While the screen caught several microbes from known …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… such as heat waves, droughts and floods. The planet’s resources are being stretched by a growing human population and … U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence … nearly 400 root and leaf samples and helped analyze the sequencing datasets. The results from the first year showed …
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JGI Interns at UC Merced Earn CAMP Merit Awards
As part of the ongoing partnership between DOE JGI and UC Merced to promote diversity and inclusion in … Mentor: Dr. Arnold Kim)   “It is a beautiful thing, that our young campus earned 25% of the research awards,” said … “This is a true testament of the hard work and caliber of our first-generation students and the amazing mentorship …
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Short sequence motifs, overrepresented in mammalian conserved non-coding sequences
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JGI@25: Roots of a Mutualist Relationship
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … of the forest fungus Laccaria bicolor was published in the journal Nature . The mushroom has a symbiotic relationship …
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JGI & KBase at PAG XXVII
… 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems … and how you can use the KBase system to accelerate your plant genomics research. Click here to download a list … activities of plant systems that make use of these resources will present on their work. BER Plant Genomic Science …
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