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Metagenomic stable isotope probing reveals bacteriophage participation in soil carbon cycling
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Integrating chromatin conformation information in a self-supervised learning model improves metagenome binning
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Size-fractionated metagenomic depth profiles from two sulfidic stations in the Chesapeake Bay.
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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The Power of One, Amplified
… preview of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated … approaches including amplicon and metagenomic sequencing. For example, they showed that the composition of the … cannot be cultivated in the lab. What makes this particular study unique is the application of single cell genomics to a …
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JGI Workshop at SIMB NP Meeting
… Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a … often tedious and resource intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters … that address these issues. Check the scientific program for relevant posters. …
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Data Ecosystem
… biology. The collaborations present exciting possibilities for scientific exploration, granting access to diverse … way. We also work with our partners to ensure platforms are future-ready for advancements enabled by artificial intelligence and … to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State University campuses for biotechnology education …
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Tracing the Evolution of Shiitake Mushrooms
… 60 existing sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks the enzymes these fungi use to break down … genomes and their evolution could provide strategies for converting plant waste into sugars for  biofuel …
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Diverse ecophysiological adaptations of subsurface Thaumarchaeota in floodplain sediments revealed through genome-resolved metagenomics
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Depth-discrete metagenomics reveals the roles of microbes in biogeochemical cycling in the tropical freshwater Lake Tanganyika
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Shotgun metagenomic analysis of microbial communities from the Loxahatchee nature preserve in the Florida Everglades
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