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… with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to … possibilities, and maximizes returns from the demanding nature of SIP experiments.  Especially as machine learning … User Engagement Lead for the DOE Systems Biology Knowledgebase (KBase), as well as researchers from Pacific …

Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every …

Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut National … source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every …

… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in many regions due to more extreme … in Sorghum (EPICON) is a five-year, multi-institution project funded by the DOE Office of Biological and …

Janey provides support for custom single-cell user projects and projects within the group. …

After studying the mechanism of action of antifungal natural products and their derivatives during her Ph.D. in Microbiology at the Eberhard Karls … Reviewer for major journals and funding agencies, including Nature, Nature Biotechnology, Nature Methods, Nature …

Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology … the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. (2023) …

Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … targets of hypermutation in the global microbiome. Nature Communications 12, 3076. Roux et al., 2018. Minimum …

Research in the Analysis R&D group focuses on developing new … analyses and software to enable “grand-scale” scientific projects. These solutions include large-scale genome … data analysis in the cow rumen and sheep rumen metagenome projects. Standing at the intersection between the rapid …

Marcel is in charge of several production pipelines (gene calling, functional annotation and methylomics) that run on … exchange and assists with large scale computations on R&D projects. …

Matt is broadly interested in the interactions between microbial life and environment, and … interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …

Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s … community. She also provides support for user science and projects through implementation of advanced analysis …