DOE JGI Metagenome Workflow
Results
Activity-based, genome-resolved metagenomics uncovers key populations and pathways involved in subsurface conversions of coal to methane
Occurrence and expression of genes encoding methyl-compound production in rumen bacteria
Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics
Subsurface hydrocarbon degradation strategies in low- and high-sulfate coal seam communities identified with activity-based metagenomics
Survey of Early-Diverging Lineages of Fungi Reveals Abundant and Diverse Mycoviruses
Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
Metagenomics uncovers gaps in amplicon-based detection of microbial diversity
Methane yield phenotypes linked to differential gene expression in the sheep rumen microbiome
Catabolic repression in early-diverging anaerobic fungi is partially mediated by natural antisense transcripts
A pipeline for targeted metagenomics of environmental bacteria
Unraveling the functional dark matter through global metagenomics
