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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome … This year’s cohort for the JGI-UC Merced Internship Program was brimming with excitement and determination as they came … Schulz, Structure Prediction to Annotate Novel Viruses: the Case of Polintoviruses Josue Duque and mentor Miguel Romero, …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If … diversifying an investment portfolio. If a stress like wildfire or drought threatens some fungal species, other fungi …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a scientific … over a billion years old. It’s an insanely diverse group of organisms that include some delicious additions to a …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building … (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data … most advanced integrative genome science capabilities in support of the DOE’s research mission.     Director's …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of natural microbial … of cutting-edge approaches.  Our group also seeks out new approaches that utilize microfluidics/microdroplet … of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of … regulation is critical to ensuring genes vital for growth and survival across various environments are …
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Cultivating Symbiotic Antarctic Microbes
Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in environmental … of an obligate symbiont—entirely dependent on the other for required nutrients—is genome size. The obligate … microscopy and omics techniques enabled the team to closely study the nature of the Nanohaloarchaeota species’ …
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A Grass Model to Help Improve Giant Miscanthus
The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … of the genome sequence also provides insights into how the multiple chromosomes of Miscanthus arose by ancient … Researchers at CABBI and elsewhere are following up on these discoveries to develop new varieties of …
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Yeasts and how they came to be
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… expands the global diversity of large and giant viruses. While the microbes in a single drop of water could outnumber … belong to the nucleocytoplasmic large DNA viruses (NCLDV) supergroup. The expansion of the diversity for large and giant viruses offered the researchers insights …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While … for Venom Associated Microbes and Parasites. Ul-Hasan credits her JGI-UC Merced summer internship for helping lay …
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