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MGM Workshop at Fisabio Summer School 2025
… research, the health sciences and related fields who are interested in learning and sharing concepts, tools and … research results in genomics, metagenomics and the human microbiome. The workshop will train participants in … training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia Ivanova and …
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Microbial Genomics & Metagenomics (MGM) Workshop
… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop … familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational … platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… Register here Book your stay at the conference venue This inaugural event will bring together researchers across major … and applying laboratory ecosystems to help transition microbiome science from largely observational to … precise manipulation and reproducible experimentation of microbiome dynamics. Together, we will explore cutting-edge …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for students and … biology analysis. KBase also supports  MICROnet (Microbiomes In Computational Research Opportunities … research and skill development while curating reusable microbiome data. Undergraduate educators are partnering with …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and … they likely help their hosts. The Impact Meters below the Earth’s surface, within the crust, there is a vast ecosystem … all operate in concert to form the foundation of this deep Earth ecosystem. For example, when certain viruses attack, …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The … (Spruce and Peatland Responses Under Changing Environments) project, assessing how northern peatland ecosystems respond … stored in peatlands, which make up nearly 3 percent of the earth’s land surface. In the New Phytologist, researchers …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental … — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help … environmental conditions may affect metabolic activity of microbiomes. This is key because these examples were picked …
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The endosymbiotic box of protective tricks
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day … — contributed to the ecological resistance of plants to the Earth’s ever-changing harsh habitats, thus allowing them to … plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. Department of Energy (DOE) …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold much of the Earth’s carbon as well as material that can be converted to … The Impact Despite constituting less than 5% of land on Earth, peatlands store approximately one-third of the …
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What Happens Underground Influences Global Nutrient Cycles
… EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, … on an aspect of the  Phenotypic Response of the Soil Microbiome to Environmental Perturbations   under PNNL’s … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI at the AGU Fall Meeting
… This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in … poster B45O-1813  : Maggie Bowman, PNNL: “EMSL’s 1000 Soils Project: core collection strategy and data types available” … Data Standards and Reproducible Workflows To Advance Earth System Science” 11:18am Convention Center, Rm 238-239: …
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