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Year in Review: JGI’s 2018 Progress Report Available Now
… by the JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and …
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High-Quality Draft Nuclear and Mitochondrial Genome Sequence of Fusarium oxysporum f. sp. albedinis strain 9, the Causal Agent of Bayoud Disease on Date Palm.
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JGI Launches Latest Strategic Plan
… quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year history. In … include JGI’s emerging leadership role in a Microbiome Data Science effort (pages 37-39) and the launching of a …
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Len Pennacchio
… the JGI’s primary point of contact for all High-Throughput Data Generation Platforms (Sequencing, Single Cell, DNA …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… of a virus relative to its host (inferred through sequence data) can suggest different predatory behaviors. A high … Winner” — “Piggyback the Winner.” In the microbial mat, the data suggest viruses are indeed piggybacking their hosts. … terrestrial environment with low mobility. The metagenomic data suggests that viruses don’t diffuse well through the …
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2022 Progress Report
Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area …
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JGI-KBase Panel at SACNAS
… to get credit for their scientific contributions through data citations, authorship, and presenter opportunities. …
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JGI on the 2021 Highly Cited Researchers List
… multi-institutional research team that combined field data with a reference switchgrass genome to associate … hosted two JGI Engagement Webinars promoting the JGI fungal data portal MycoCosm and the algal portal PhycoCosm. … global cities. He and his colleagues used an extensive JGI database to investigate viruses detected in the samples. …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… switchgrass genome sequence is available on the JGI plant data portal Phytozome. The combination of field data and genetic information has allowed the research team … biomass-based fuels.   … P. virgatum on Phytozome … Plant Dataset …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… them are actinobacteria. And so we get a lot of them from databases of organisms, so things like the NRL database - or online catalog, I guess. So we've also been … that makes it really challenging to actually interpret the data. And so we've been able to get these-- DAN: In terms of …
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Biotech Partners Summer Intern Co-Authors NAR Paper
Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, … he curated several small sets of phylogeny, biosample metadata tasks we assigned.”       Click here to watch a video …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate … in marine microbial communities. Using the JGI-generated data, Sachia Traving, a former postdoctoral fellow in the …
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