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Metagenomic datasets could help map out microbial diversity hotspots … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … biodiversity. Using publicly available genome sequence data generated over the past three decades, their study …

I started this, uh, summer internship was working with big data, but something that I learned from this program was how … And I’m excited to take that with me, along with other tools that I can use to, um, perform computational biology.  …

I really hope to gain laboratory experience working with tools as well as laboratory machines in hopes of …

… is central to our ability to offer host-engineering for our users,” says JGI Director Nigel Mouncey. Using CRAGE, JGI has established a portfolio of microbial hosts that users can select to be engineered. “Piloting access to this … such as individual genes, whole pathways, genome-editing tools, and reporters.” JGI-developed genetic engineering …

… and combining the information with previously published datasets. The work was  recently published in the journal  … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … “This represents the largest integration of single-cell datasets in plants and provides a foundation for still …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on just how morel fruiting is … every family of fungi. In the following guest piece, JGI user Dr. Tan details the results of the team’s work. Morels … . … Morel Mushrooms on MycoCosm Data Portal …

… related to such aquatic species as diatoms and kelp. Dubbed Phytopthora ramorum (pronounced: Fy-TOFF-thor-uh … in their neighborhoods and nearby forests with the right tools to track infection. The parallel development of the … large-scale “citizen science” project to generate real-time data for modeling and predicting the spread of a plant …

… eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, … biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded …

… metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State … Professor Matthias Hess, also the chair of the JGI User Executive Committee, on how that study went from the …

DOE user facilities EMSL and JGI announce FY 2020 collaborative … Tfaily of the University of Arizona. Her team aims to use data from an interdisciplinary field campaign taking place … drought and multi-isotope labeling experiment, and the data will allow them to better understand the impacts of …

… the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … nonpolar metabolite analysis, creation of large metabolite databases by running 1000s of metabolite standards, and … custom software for integrating metabolomics with genomic data (MAGI) for functional annotation and identifying …

Czech Academy of Sciences first needed to build a detailed database on the denizens in the soil. While large protein databases, like UniProt, exist, are not specific enough for … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …