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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is … the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists … like plasmids, the picture is far from complete.  In 2021 , scientists at St. Jude Children’s Research Hospital …
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Genome expansion by allopolyploidization in the fungal strain Coniochaeta 2T2.1 and its exceptional lignocellulolytic machinery
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Genome sequence of the Trifolium rueppellianum - nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and organisms than … — that’s three-quadrillion base pairs of DNA sequence! To meet this “ data tsunami ,” as Kathy Yelick of the Computing Sciences Area at Lawrence Berkeley …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint … of RNA molecules transcribed from all the genes within a cell or tissue at a specific time or under specific … keep updating the Gene Atlas with curated datasets from CSP projects and aim to improve plant gene function …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … our little section on international genome miners, and today we have Francisco Barona-Goméz, or Paco, as he prefers … also talk about some of the great science that he does. So welcome to the show Paco Barona-Gomez from the Laboratorio …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and … decompose debris, mobilize nutrients from that decay, and deliver those nutrients to tree roots and soil. These fungi … said, the 1000 Fungal Genomes project, together with other CSP projects, had sequenced over 2,000 fungal genomes. The …
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Tracing the Evolution of Shiitake Mushrooms
… often source their nutrients — the shii tree, a Japanese relative of the oak. These fungi are part of the genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and … sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome …
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Nick Everson
… Resources, Facilities, IT, Shipping and Receiving, Lab Automation, and Administration departments. He previously served as JGI’s Business Manager from 2007 to 2012, overseeing all financial and logistics activities.  … & Engineering Division. Prior to his tenure with Berkeley Lab, he served in the US Navy for 6 years as a …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… JGI will advance the bioeconomy, leveraging partnerships to advance foundational science, creating opportunities for … of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year Strategic Plan: Innovating Genomics to Serve the Changing Planet (download a copy at …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… strategy we are far more familiar with: differentiating into male and female sexes. For the first time, the sex … shrub willow have been sequenced with sufficient resolution to analyze their structure. Scientists found both a gene likely important for sex determination and a shared genetic …
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VEGA Symposium
… fees:  Early Bird rates available now General & Berkeley Lab Attendee – $250 Students & Postdocs – $200 Regular … every two years since 2018, the goal of this symposium is to bring together a “Viral Ecogenomics” community to foster … providing an overview of the latest discoveries related to functional characterization of novel viral diversity, …
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