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A Plant Root Atlas for Tracking Developmental Trajectories
… scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … by then-Biosciences scientist Diane Dickel in 2017. In 2019, plant single-cell methods were officially called out … Research Grant   … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer … Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on …
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Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15T)
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … microorganisms had a close relationship. Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI Announces 2025 New Investigator Portfolio
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Meeting Report: “Metagenomics, Metadata and Meta-analysis” (M3) Workshop at the Pacific Symposium on Biocomputing 2010
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Genome Sequence of the Alkaline-Tolerant Cellulomonas sp. Strain FA1
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Complete genome sequence of Paenibacillus sp. strain JDR-2
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A Step Toward Controlling Soybean Rust
… yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio … Research (INRA)  proposed sequencing a reference genome for  P. pachyrhizi to develop better strategies to … rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome sequence in 2010.     …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes of giant viruses are on the order of 100 times the … to viral lineages, and predominantly in samples from marine (55%) and freshwater (40%) environments. As a result, …
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Scaling Up Existing Skill Sets
… to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their experiences below. … Year: 3rd year undergraduate student Mentor: Zhong Wang, Genome Analysis What effect has your summer internship with … the Biophysics program. (Graduated from UC Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial …
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the … sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome … by FEDER funds) to F.J.R.-D., S.C., and A.T.M., grant PID2019-103901GB-I00 of the Spanish Ministry of Science and …
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