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Ancient Algae Reveal Secrets of Plant Evolution
… Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which were isolated … in improving plant resilience and productivity. The algal genomes sequences are available on the JGI’s  PhycoCosm … the Joint Genome Institute Community Science Program (CSP), the United States Department of Agriculture (USDA) …
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Genome sequence of Ensifer medicae strain WSM1115; an acid-tolerant Medicago-nodulating microsymbiont from Samothraki, Greece
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Game On: High School Students Drive Everglades Metagenomics Study
… her thoughts about the experience below. In the summer of 2018, Jonathan Benskin was preparing to teach a second year … able to receive training for the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal for their sample …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… assembly of two Corymbia citriodora subspecies variegata genomes allowed researchers to study the conservation and … (JBEI), the JGI worked on resequencing several eucalypt genomes to establish the feasibility of genome wide …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… ground and what escapes to the atmosphere in the form of greenhouse gases (e.g., carbon dioxide, methane, and nitrous … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … Integrating Collaborations for User Science (FICUS) initiative, which allows researchers to integrate the …
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Enlarging Windows into Understanding Gene Functions
… it can also serve as a stepping stone to studying many genomes simultaneously through multiDAP, which allows … researchers to conduct comparative analyses across the genomes of multiple species in a single experiment. … proposal through the JGI’s Community Science Program (CSP) focuses on a fungal comparative ENCODE project known as …
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Complete Genome Sequence of Rahnella aquatilis CIP 78.65
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, … Soghomonian share what it was like to take on one of these genomes.  …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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Effects of Polar Light Cycle on Microbial Food Web
… there is a strong chemical and salinity gradient — and green sulfur bacteria,  Chlorobium , blooms. The specific … the polar region’s summer months, this study found that the green sulfur bacteria population spiked to 83%, only to …
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Diverse members of the Xylariales lack canonical mating-type regions
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … The Science Since its launch 25 years ago, the  Genomes OnLine Database has matured from six projects on a … and enabling large-scale comparative genomics analysis initiatives. GOLD not only curates sequencing projects …
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