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Biases in genome reconstruction from metagenomic data
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JGI@25: Roots of a Mutualist Relationship
… genome sequence of a mycorrhizal fungus shifted the focus from looking at single organisms to applying a broader ecosystem … (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, …
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JGI@25: Stories from Intern Alumni
Over the past 25 years, the JGI has hosted interns from a number of universities and organizations. From field research and wet lab experiments, to …
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Metagenomes and Metagenome-Assembled Genomes from Substrate-Amended Hot Spring Sediment Incubations from Yellowstone National Park
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
California (UC), Merced assistant professor Suzanne Sindi from the School of Natural Sciences and started a program … Jess Jarett, a postdoctoral fellow in Tanja Woyke’s Single Cells Group who mentored 2018 intern Akshay Paropkari, …
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Genomic Characterization of Candidate Division LCP-89 Reveals an Atypical Cell Wall Structure, Microcompartment Production, and Dual Respiratory and Fermentative Capacities.
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Picking Up Threads of Cotton Genomics
… darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in size, and are hybrids comprised of cotton A and cotton D genomes. A multi-institutional team including researchers at … the textile industry, and consumers will derive benefit from this high impact science for years to come,” said Don …
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New Research Sheds Light on Diversity in the Deep Sea
… and other microorganisms that live there.  Researchers from Portland State University and the University of … study as well as  genome analysis, providing authors a more complete picture of the taxonomic composition and metabolic … datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published …
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BdCESA7, BdCESA8, and BdPMT Utility Promoter Constructs for Targeted Expression to Secondary Cell-Wall-Forming Cells of Grasses
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Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence
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Reductive amination cascades in cell‐free and resting whole cell formats for valorization of lignin deconstruction products
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A nucleoside signal generated by a fungal endophyte regulates host cell death and promotes root colonization
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