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An Earth Month Look at Sustainability Efforts at the JGI
… Garden Club, hosted a DIY Succulent Workshop and Plant Sale. All year, the JGI helps support finding … challenges. And many JGIers work to connect those big goals with their everyday activities, striving for … ZERO Waste Initiative members took on another new effort: planting a potted sustainable garden outside the building. …
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Dan Rokhsar
… in the sequencing and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics … on understanding the origin, evolution, and diversity of plants and animals by combining computational genome …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… the evolutionary past may hold key insights. The way that plants process nutrients has a rich back story — they rely … work was our focus on all the kingdoms, including animals, plants, bacteria, archaea and fungi. We thought this kind of … of these enzymes across 90 species. They queried the genomes of 15 species from each of six kingdoms: eubacteria, …
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FICUS-NERSC/KBASE
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Understanding Wildfire Recovery, Starting in Soil
… process carbon and nitrogen, paving the way for future plants and trees to grow. However, fire changes the microbes … to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting … questions about what the soil microbiome looks like over longer times post-fire, and how long it takes a forest to …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, … researchers to compare across very distant species that no longer mate to produce progeny. The ability to pinpoint … improve our understanding of fungal diversity by sequencing genomes from across the fungal Tree of Life, but they also …
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CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
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Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass
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The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
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The CC–NB–LRR protein BSR1 from Brachypodium confers resistance to Barley stripe mosaic virus in gramineous plants by recognising TGB1 movement protein
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Calculating the Costs of Multiple Switchgrass Gene Copies
… could be generating these observed patterns. As many other plant species have natural cytotype variation, we also hoped … hundreds of naturally-occurring genotypes (in this case, a plant’s complete genetic makeup) and 10 common gardens. We … like switchgrass respond to pronounced climate shifts. (C4 plants use a more efficient form of photosynthesis that …
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place … and how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of … relevant to JGI science at PAG XXVII. On January 14, JGI Plant Program head Jeremy Schmutz and  KBase Co-PI Bob …
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