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EcoBOT: an AI/ML enabled automated phenotyping capability for model plants
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User Support
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. DOE JGI Project Managers … of the project’s completion and receive instructions for how to access your data, share with collaborators, and …
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The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (DAOM 197198) reveals functional tradeoffs in an obligate symbiont
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind … abiotic stress tolerance, and the mechanisms by which plants interact with their microbiomes. In addition, his …
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Russulaceae: a new genomic dataset to study ecosystem function and evolutionary diversification of ectomycorrhizal fungi with their tree associates
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PCR and Omics Based Techniques to Study the Diversity, Ecology and Biology of Anaerobic Fungi: Insights, Challenges and Opportunities
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Tissue Cultivation, Preparation, and Extraction of High Molecular Weight DNA for Single-Molecule Genome Sequencing of Plant-Associated Fungi
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A large-scale screening campaign of putative carbohydrate-active enzymes reveals a novel xylanase from anaerobic gut fungi
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Diversity of Sordariales Fungi: Identification of Seven New Species of Naviculisporaceae Through Morphological Analyses and Genome Sequencing
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining … by altering their growth program, and on how plants coordinate their gene expression with light and temperature … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … P. virgatum on Phytozome … Plant Dataset …
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