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Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
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Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage
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Gene Expression: From On-Off Switch to Dial
Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science Scientists have … approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of … the realm of bioenergy optimization. Summary Life is all about balance. This study,  recently published in the  …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative … conducted through the  Belowground Biogeochemistry Scientific Focus Area (SFA), supported by the Terrestrial … the Sierra Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks to warming …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… which microbes are present in a sample, to generate data about which organisms are active, and which microbes are … microbial ecosystems. These communities harbor tens of thousands of different organisms who all consume different … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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JGI Accepts 17 Proposals for Community Science Program
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of 50 letters of intent submitted. Many of the proposals focus on harnessing genomics to developing sustainable … Berkeley aims to redesign and engineer algae by identifying the algal regulators that could boost lipid …
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Polysaccharide niche partitioning of distinct Polaribacter clades during North Sea spring algal blooms
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Characterization of a novel polyextremotolerant fungus, Exophiala viscosa, with insights into its melanin regulation and ecological niche.
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Gotta Catch 'Em Gall
… called galls.  In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these weird little pods. …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… carbon and cycle key nutrients like nitrogen and phosphorus.  This way, the fungi of forest soils hold keys to tree … give researchers a way to access much more information about fungi in these environments. “Now with these new tools … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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Quantitative iTRAQ-based secretome analysis reveals species-specific and temporal shifts in carbon utilization strategies among manganese(II)-oxidizing Ascomycete fungi
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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