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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine … researchers exploring a dark room with a flashlight, only able to clearly identify what falls within that single … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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New Research Sheds Light on Diversity in the Deep Sea
… array of microorganisms adapted to living in extreme conditions. At these vents, and underwater volcanoes,  researchers … studied microbial communities across five oceanic regions. In doing so, they found a high degree of variability in … This work was funded by the US-National Science Foundation grants OCE-0728391, OCE-0937404, …
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Four Researchers Join JGI User Executive Committee
… of Energy user facility located at Lawrence Berkeley National Laboratory. Holly Bik of the University of Georgia, … University. He studies fungal biodiversity, ecology, and evolution, with a focus on microbiome sciences and fungal … of California, Davis. His current research focuses on the evolution, ecology, genomics and function of microbes and …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make this whole “on-time thing” a habit! I’m really not good at that, you … Natural Prodcast's interview with Elizabeth "Betsy" Parkinson, from Purdue, about bacterial signaling molecules and …
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User Programs
… Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status CLOSED CLOSED ONGOING ONGOING CLOSED Who Should Apply? Investigators with research …
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Evolution of a multi‐step phosphorelay signal transduction system in Ensifer: recruitment of the sigma factor RpoN and a novel enhancer‐binding protein triggers acid‐activated gene expression
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JGI Announces 2025 New Investigator Portfolio
… Flavia Winck Vischi, Jennifer Wisecaver, Yaqi You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the … on rhizosphere microbiomes, and the metabolic pathways of algae. They will harness JGI capabilities such as …
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The Busy World of Deep Sea Eruptions
… The ocean depths are vast and dark. But there are hotspots on the ocean floor — underwater volcanoes and hydrothermal … and understanding how they’ve adapted to this extreme environment.   …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … of other organisms. As they infect microbes like bacteria, algae and protists, all kinds of viruses impact many …
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You Can Move, But You Can’t Hide
… and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found … like viruses and plasmids drive microbial processes and evolution. This is because MGEs can affect a microbe’s … By understanding more about the genomics of MGEs and their evolution at the cellular level, scientists can better …
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Three Join the JGI User Executive Committee
… (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest National … is an Assistant Professor in the Department of Ecology, Evolution and Marine Biology at UCSB, where she leads a research group investigating the physiology and evolution of marine aggregates and biofilms. She credits the …
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Advances and challenges in understanding evolution through genome comparison: meeting report of the European Molecular Biology Organization (EMBO) lecture course “Evolutionary and Comparative Genomics”
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