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… Using metagenomes recovered directly from environmental samples and cultivated microbes, researchers have been able … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, experimentally demonstrated that … haloarchaeon  Halorubrum lacusprofundi . To do this, water samples were collected from the Rauer 1 and Club lakes in …

… engagement activities under the umbrella of the SOD Blitz Project. In hopes of controlling the spread of the disease, … represent the first-ever large-scale “citizen science” project to generate real-time data for modeling and … lab in Mulford Hall. There, they conducted DNA analyses of samples collected on recent SOD Blitz expeditions. The team …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Sciences Laboratory (EMSL), a DOE Office of Science user facility at Pacific Northwest National Laboratory. The … enabled by the Facilities Integrating Collaborations for User Science (FICUS) initiative, which allows researchers to …

… to go beyond understanding which microbes are present in a sample, to generate data about which organisms are active, … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … labs, as well as Pett-Ridge’s group, will assemble input materials, with eight or nine different teams then …

… in plant cells. Using photosynthesis, they take raw materials including sunlight, carbon and water, to convert … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Functional Genomics call is open year-round, and reviews submissions twice a year. Proposals submitted by July 30, …

… joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership between JGI and the … Molecular Foundry, a nanoscale research and knowledge-based user facility at Berkeley Lab. She is spearheading the development of a joint user capability between the JGI and Molecular Foundry for …

… proposals.  Tips: Contact us with your questions (jgi-jira+pmo[email protected]) Carefully read our proposal call … 500-gigabase cap and that you don’t request outside of the sample range that’s listed. Q: What are the pros and cons of … to reach that maximum with broader questions and broader project scope? A: Focus on strong science and …

… cells from a single low diversity hot spring sediment sample. Their work showed that single cell genomics can add … is single cell genomics, where cells from environmental samples are first separated, and their genomes then … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… mimicking an array of microbial life. By leveraging massive user-generated datasets at the JGI and other publicly … Berkeley National Laboratory (Berkeley Lab), led the project. He explained that large language models—artificial … GenomeOcean encompasses approximately 645.4 Gbp of high-quality contigs from diverse sources, derived from 219 Tb of …

… ecosystems. Viruses rarely grow well in environmental samples brought back to a lab, because they often need … to replicate. Sequencing genetic material directly from samples sidesteps these challenges, since it doesn’t require … tool, CheckV, assesses viral genomes, and grades their quality based on completeness. Along with expanding the …

… .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and … of biological systems. The JGI strategic plan lays out how users and the global research community will bridge … and help cultivate new user communities. Biomolecular materials initiative. Pairing the JGI’s genomic capabilities …

… Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the … challenges UC Merced graduate students with individual projects at the DOE JGI that provide hands-on experience in … that would allow users to simultaneously run several programs for RNA-Seq assembly to determine which is best for …