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… messenger RNA sequences (transcriptomes) from their soil samples. This gene expression dataset was particularly … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Microbes with Metagenomics  By leveraging metagenomics to sample the entirety of a microbial community out in its … as through the Facilities Integrating Collaborations for User Science Program (FICUS) with the Environmental …

… a similar single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His … also carries out custom preparative work for difficult user projects, including those that require fluorescence … reactions, increase throughput, and enable processing of samples that would not be possible with traditional …

… through the Department of Energy-funded National Labs, User Facilities and Programs, and introduce best practices for anyone to get … program managers, and intern alumni will introduce projects designed for students to gain research experience …

Journal publication caps JGI pilot project with fledgling Florida high school scientists. The … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … with the proper permits, to the refuge to collect soil samples from multiple locations. Back in the classroom, JGI …

University in Fort Collins. He’s part of a JGI-supported project studying the world’s rivers and their microbial … are in their biomass, because that affects the quality of the food of these invertebrates that we use as … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life … some experience with OpenACC or CUDA – links to training materials will be sent out. The main benefit is professional …

… at a genetic level, how does  Y. lipolytica work? The project was a multi-institutional effort led by … Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica is a tantalizing microbial … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No.  …

… of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, has … (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the … was done under Contract DE-AC52-07NA2734. Funding for this project was provided by the U.S. National Science Foundation …

After successful completion of the human genome project, Professor Dr. Rokhsar ’s team has continued to …

… to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of … 15, 1569–1584. Nayfach et al., 2020. CheckV assesses the quality and completeness of metagenome-assembled viral …

… missing from the analysis (due to extinction or you didn’t sample it). But once we deciphered the subgenomes we came up … specific procedure.” The rapport they built during this project and others (including the dissertation that preceded … in genomes.” He’s working with Rokhsar on a newer genome project, and enjoys the fact that he can use what they’ve …