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Qualitative and quantitative resistances to leaf rust finely mapped within two nucleotide‐binding site leucine‐rich repeat (NBS‐LRR)‐rich genomic regions of chromosome 19 in poplar
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes … cells from communities of uncultivated microbes, and then efficiently retrieve and characterize their genomes. The … worked with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent … systems, and their health is heavily reliant on the energy and nutrient flows that the microbes in these bodies … and in turn affecting environmental and human health, energy production and agriculture. Understanding the …
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting …
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THE Bioenergy Tree
The US Department of Energy’s favorite tree is poplar. They’re the fastest growing trees in the Northern Hemisphere, making them tantalizing plants to harness for bioenergy. In this episode, hear from Oak Ridge National …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their … an ongoing collaborative effort to improve the emerging bioenergy crop switchgrass ( Panicum virgatum ), which has … having the gardens as a resource helps breeders find genetic regions of interest.” The combination of field …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal … associations allow host plants, such as candidate  bioenergy feedstock crops, to acquire nutrients. Additionally, … Centre, Clark University, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change impact on … the water samples were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … up and down the water column. They recently shared their findings in Communications Biology . They reported that the …
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Introducing New Members of the JGI User Executive Committee
… – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here to view the full roster of members. … and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been an active …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  Neurospora … cell-wall degrading enzymes (PCWDEs) that allow them to efficiently break down the wide array of simple and complex … present in plant biomass. This is of interest for bioenergy researchers looking to improve the industrial …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs growth of poplar, a … hardwood tree in the western United States, making it an energy feedstock of particular interest to the U.S. … both plants and root microbiomes to grow energy crops more efficiently. Summary To interrogate the close partnership of …
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