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Gotta Catch 'Em Gall
Kasey Markel and Patrick Shih (UC Berkeley and the Joint BioEnergy Institute) are looking … they’ve looked into wasps that program oak trees to raise their young in structures called galls.  In this episode, … how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these …
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IMG-ABC v.5.0: an update to the IMG/Atlas of Biosynthetic Gene Clusters Knowledgebase
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Nikos Kyrpides
… at the University of Illinois at Urbana-Champaign and at Argonne National Laboratory. Dr. Kyrpides’ research focus on … Nature Biotechnol . 39:499-509. Harrington et al. 2020. A scoutRNA Is Required for Some Type V CRISPR-Cas … Human Intestinal Tract ( MetaHIT ); Community Cyber-infrastructure for Advanced Marine Microbial Ecology Research and …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, … DNA Synthesis Science Programs and draw from the infrastructure of Genomic Technologies and Data Science & …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
Back in 2011, JGI-supported researchers published a paper in the journal … California State University campuses for biotechnology education as part of a course-based undergraduate resource …
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Partners
… science and serve as impact multipliers . The JGI has a long-term partnership with the HudsonAlpha Institute for … Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase … with other user facilities enable the ability to leverage their capabilities through the Facilities Integrating …
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User Executive Committee
The UEC represents the JGI user community and is responsible for providing input … advice on JGI policies and practices that affect users and their science including technical capabilities offered, …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… recognize that crop varieties grow best in certain regions. Most plant species have adapted to their local environments; for example, crop and ornamental … Identifying and breeding varieties that have high productivity across a range of environments is becoming …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that influence system behavior.  Through this … computational analysis.   Overview of metabolomics products At JGI, in-depth molecular profiles are generated for …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring users … have access to cutting-edge capabilities to help advance their science by generating data in three overarching …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks … images in many regions due to more extreme weather events such as heat waves, droughts and floods. The planet’s … Half a billion people consider sorghum a staple food in their diet, and the Department of Energy (DOE) also …
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JGIota: A Biofuel Breakthrough in Anaerobic Fungi with Michelle O'Malley and Tom Lankiewicz
Michelle O’Malley and Tom Lankiewicz of UC Santa Barbara discuss the importance of studying … well as a recent discovery that turns scientific presumption on its head and opens up a new avenue to explore for efficient biofuel production. …
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