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Gene Expression: From On-Off Switch to Dial
Scientists have developed a more nuanced library approach to tuning gene expression in metabolic pathways. Compared to … lead to sustainable pathways for making high-value bioproducts including biofuels. In addition, the team says that … systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials … with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging … 2015 34th Annual Women’s Recognition Award for Science, 2020 NIH NRSA Postdoctoral Fellowship (F32), 2012 – 2015  …
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Finding the Fermenters
… prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with little or no oxygen, life had found other ways to produce energy, using a process called fermentation. To better … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Fungal Friends or Foes in Plant Roots
… boost yields for both food and for candidate bioenergy feedstock crops. Summary A plant is like an office building, its … relationships, but not all plants and fungi can form such symbiotic partnerships. To learn more about these other … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  Neurospora crassa . The … California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate … and both organisms rearrange their cells around this structure to facilitate sharing.  Recently, researchers have … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Virus-Microbe Interactions of Mud Island Mangroves
… will defend his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science Graduate Student … program , which awards graduate students the opportunity to pursue part of their thesis research at one of the DOE …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
The Berkeley Lab Biosciences Area Entrepreneurship Program presents… Eyes on the Prize – Launching & Sustaining … with local industry leaders: Arvind Gupta , Managing Director and Founder, Indie Bio John Cumbers , CEO and Founder, … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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JGIota: The Algae Nicknamed ‘Chlamy’
… alga – Chlamydomonas reinhardtii – that’s managed to have a big impact. UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it has to teach us about …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play an outsize role in cycling carbon and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … zinc-binding proteins are important for primary metabolism such as photosynthesis and gene regulation.  Mock and his …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … AN, et al. Mass Spectrometry for Natural Product Discovery. 2020.  Reference Module in Chemistry, Molecular Sciences and …
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