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Bacteria and Fungi Divvy Up the Work in Forest Floor
… researchers have found that there is a striking division of labor between the two groups. Fungi are much more active in … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, to create the database. JGI …
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Forming Scientific Connections and Building Community
… research is very sentimental to me.” Mentors: Crysten Blaby-Haas & Bikash Shrestha Project: “ Detecting Isotope … a part of a dynamic and innovative environment where collaboration and research discovery are at the forefront.” Mentors: Rex Malmstrom, Nandita Nath & W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded …
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Eelgrass Proves to Be Much Younger Than We Thought
… events in the Atlantic ocean occurring within the last 40,000 years. The Impact Eelgrass represents one of the … a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, provided sequence resources — including the …
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Fungus Fuels Tree Growth
Center for Bioenergy Innovation (CBI) at Oak Ridge National Laboratory. To see how the fungus affected poplar growth, … Plant-Microbe Interfaces program at the Oak Ridge National Laboratory (ORNL) sponsored by the Office of Biological and … Support was also provided by the NSF Zygolife (NSF-DEB1441715), the United States National Science Foundation (NSF) …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… to expand its habitat range. But at what cost?  A collaborative team led by researchers at the University of … postdoctoral researcher Joseph Napier from the Juenger lab and computational biologist Paul Grabowski of … across the species. These are primarily tetraploids (4X or four copies of the genome) and octoploids (8X or eight …
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The JGI Data Portal: Improving User Experience
The human-centered, agile collaboration between the JGI and the information technology … Google Analytics data, the team noticed that a large percentage of Phytozome users who were seeking to download all the … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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JGI on the 2020 Highly Cited Researchers List
… that led to the release of 52,515 publicly-available microbial draft genomes generated from environmental … to help researchers assess and improve the quality of metagenome-assembled viral genomes. The paper appeared in  … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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Expanding Virophage Diversity
… approaches. By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… the data, either by adding team members as co-PIs or collaborators on the proposal, or at the very least providing … can show reviewers the team is really able to take advantage of the data and work with the data. Q: How would you … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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Game On: High School Students Drive Everglades Metagenomics Study
… email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy … along with water content. The class had to work collaboratively and creatively to come up with a sense of what … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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A Step Toward Controlling Soybean Rust
… a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of …
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