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Metapangenomics reveals depth-dependent shifts in metabolic potential for the ubiquitous marine bacterial SAR324 lineage
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Mechanisms of Manganese(II) Oxidation by Filamentous Ascomycete Fungi Vary With Species and Time as a Function of Secretome Composition
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A Genome-Wide Scan for Evidence of Selection in a Maize Population Under Long-Term Artificial Selection for Ear Number
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Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems
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Scaling Up Existing Skill Sets
UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from … the area of focus of most of the rest of the group, which made it feel like I had something tangible to offer.       … during this summer is the thing I valued the most, such as AWS, Linux operation, and more. The JGI experiences are just …
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, …
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Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 … Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley … , a free, open source data science platform that allows users to explore data and share reproducible analyses …
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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into the … including deep learning algorithms for gene annotation and protein folding models, to improve the accuracy of functional … publication quality graphics and explore pangenome views of genes within and across species.  … HipMer is a …
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Heterospecific Neighbor Plants Impact Root Microbiome Diversity and Molecular Function of Root Fungi
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Draft genome sequence of strain HIMB100, a cultured representative of the SAR116 clade of marine Alphaproteobacteria
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A chromosome-level genome assembly of the varied leaved jewelflower, Streptanthus diversifolius, reveals a recent whole genome duplication
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