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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… published in  The Proceedings of the National Academy of Sciences bridges this gap, by tracing the evolution of a … Genomics and Systems Biology Division of Lawrence Berkeley National Laboratory (Berkeley Lab). He completed this work with …
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An Addiction Crucial to a Fungus’ Reproduction
… regulate key components of its reproductive machinery The Science To better understand how beneficial organisms … microsporus (Rm) and Burkholderia endobacteria, a collaborative effort led by researchers at Cornell University … scientists at the Joint Genome Institute, a DOE Office of Science User Facility was conducted to understand how the …
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The fungus that made itself at home
… Serpula lacrymans adapted to a new ecological habitat. The Science By comparing genetic information from similar … researchers at the Joint Genome Institute, a DOE Office of Science User Facility, compared the genomes of two strains … and Norwegian Research Council, the Swedish Agricultural Sciences and FORMAS, and the UK Natural Environment Research …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… may have been important in early Earth conditions. The Science Through a combination of sequencing tools and … evolution of life on Earth. For decades, longtime JGI collaborator Bill Inskeep of Montana State University has been … and direct microscopy. Through the JGI’s Community Science Program , the team used metagenome assemblies, …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… from afar, without ever hearing much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… more than a decade, researchers around the world have collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), to fill in … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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First Monoploid Reference Sequence of Sugarcane
… a reference for the highly complex sugarcane genome . The Science Most species are diploids and have two sets of … sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in developing … BioEnergy Institute, support was provided by the Office of Science of the U.S. Department of Energy under Contract No. …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… terpene synthase gene family across eucalypt lineages. The Science From the distinct smell of eucalyptus to the flavor … at the DOE Joint Genome Institute, a DOE Office of Science User Facility, revealed the largest number of TPS … BioEnergy Institute, support was provided by the Office of Science of the U.S. Department of Energy under Contract No. …
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Boosting Small Molecule Production in Super “Soup”
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, indicates metabolic pathways could be more … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Making a Lichen Together
… and alga to understand their partnership more clearly. The Science The humble lichen is a superorganism: one being that … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and his team at the JGI contributed to annotation of the genomes, available online at  PhycoCosm (for the alga genome) and  …
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Spacer2PAM: A computational framework to guide experimental determination of functional CRISPR-Cas system PAM sequences
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… lands the cover of ACS Synthetic Biology. (Wayne Keefe/Berkeley Lab) For example, the JGI first used CRAGE to engineer … select group of bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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